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Complex Record

Cathepsin V - HE, dp4

Clustering density analysis & representative configuration

Complex ID CATV404
Cathepsin Target Cathepsin V
Glycosaminoglycan Heparin
Total Clusters 3

Clustering density

Clustering Results for CATV404

DBSCAN clustering results showing the positional density of GAG ligands on the protease.

Representative population

Cluster 1 Population: 19 structures
Cluster 2 Population: 4 structures
Cluster 3 Population: 3 structures

Binding Poses: these clusters correspond directly to different localized binding poses on the cathepsin surface.

Structural clusters

CATV404-1

Contains 3 molecular dynamics representatives corresponding to dynamic binding poses.

CATV404-2

Contains 3 molecular dynamics representatives corresponding to dynamic binding poses.

CATV404-3

Contains 3 molecular dynamics representatives corresponding to dynamic binding poses.